![If Score(i, j) denotes best score to aligning A[1 : i] and B[1 : j] Score(i-1, j) + galign A[i] with GAP Score(i, j-1) + galign B[j] with GAP Score(i, - If Score(i, j) denotes best score to aligning A[1 : i] and B[1 : j] Score(i-1, j) + galign A[i] with GAP Score(i, j-1) + galign B[j] with GAP Score(i, -](https://images.slideplayer.com/15/4857608/slides/slide_18.jpg)
If Score(i, j) denotes best score to aligning A[1 : i] and B[1 : j] Score(i-1, j) + galign A[i] with GAP Score(i, j-1) + galign B[j] with GAP Score(i, -
![MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text](https://media.springernature.com/lw685/springer-static/image/art%3A10.1186%2F1471-2105-5-113/MediaObjects/12859_2004_Article_229_Fig11_HTML.jpg)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text
![Position-specific gap penalties. An alignment of two profiles X and Y.... | Download Scientific Diagram Position-specific gap penalties. An alignment of two profiles X and Y.... | Download Scientific Diagram](https://www.researchgate.net/publication/8392549/figure/fig3/AS:267624479195138@1440818056145/Position-specific-gap-penalties-An-alignment-of-two-profiles-X-and-Y-Gaps-in-sequences.png)
Position-specific gap penalties. An alignment of two profiles X and Y.... | Download Scientific Diagram
![MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text](https://media.springernature.com/lw685/springer-static/image/art%3A10.1186%2F1471-2105-5-113/MediaObjects/12859_2004_Article_229_Fig12_HTML.jpg)
MUSCLE: a multiple sequence alignment method with reduced time and space complexity | BMC Bioinformatics | Full Text
![3.6 Variations :: Chapter 3. Sequence Alignment :: Part II: Theory :: Basic local alignment search tool (blast) :: Misc :: eTutorials.org 3.6 Variations :: Chapter 3. Sequence Alignment :: Part II: Theory :: Basic local alignment search tool (blast) :: Misc :: eTutorials.org](http://etutorials.org/shared/images/tutorials/tutorial_98/blst_0307.gif)